CDS

Accession Number TCMCG057C49292
gbkey CDS
Protein Id XP_018457353.1
Location 19978476..19980929
Gene LOC108828233
GeneID 108828233
Organism Raphanus sativus

Protein

Length 817aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018601851.1
Definition PREDICTED: origin of replication complex subunit 1B-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category L
Description Component of the origin recognition complex (ORC) that binds origins of replication. It has a role in both chromosomal replication and mating type transcriptional silencing. Binds to the ARS consensus sequence (ACS) of origins of replication (By similarity). H3K4me3 effector that regulates positively the transcription of a subset of genes
KEGG_TC -
KEGG_Module M00284        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K02603        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04110        [VIEW IN KEGG]
ko04111        [VIEW IN KEGG]
ko04113        [VIEW IN KEGG]
map04110        [VIEW IN KEGG]
map04111        [VIEW IN KEGG]
map04113        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000808        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005664        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006270        [VIEW IN EMBL-EBI]
GO:0006277        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008283        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009566        [VIEW IN EMBL-EBI]
GO:0009567        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010385        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019953        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044703        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071897        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGCTTCAACTCCAAAAACCAAAACCTTCCAATCCCCAACCAAAACCCCAACTAGCAACGTCTATCGCAAATCGTACCTATCTCCTTCTTCAGCATCGCATCTGACTCCCCAAACACCACAAACCCTCACTCCTCTCCGCAGATCCGCTCGCCATGTCTCCCGCAAGATCGATCTCGGAGACGACGCCGACGACCACCAAGAGAAGAATCTCAACGCTCCGATTGAAGAAATGAATCTCATCCGAAAACGAGAGAGAGCCCCCAGAAAACAACAATCCACAGACGATCTCAAAACTCCCAACAAGAAGACTAAATCCAAATCCAATGTCAACGCGGAGGTTTCCTTCTCTCCTGTATCTCCGATTCGATCCGAGAAGAAGACGTCTACGACGAGGAAGACGAAAAACACCGAAACTCTCTCGAACAAGAGAGTGTTCTACAACAAAGTCGAATTCGACTCCGTCCAATTCCAAATCGGCGACGATGTTTACGTCAAACGAAAAGAAGAAGACGAAGAAGACGCGGAGTTCGAAGATTGCCGGATCTGCTTCAGATCAGGAAGTAGTATCAACAACGTGATGCTCGAGTGTGACGACTGCTTAGGCGGATTCCATCTGAAATGCCTGAATCCGCCGTTGAAAGAAGTCCCCGAAGGCGATTGGATCTGCAGCTTTTGTCAAGGCCACGAGGCTCCGAAACCGCCGGAAGGGAAGAAGCTGGCCAGGACCGCCAGGGAGAAGCTTCTCTCTAGCGATCTATGGGCTGCTCGGATCGAGAAGCTCTGGAGAGGAGGAGACGGTGTGTATTGGATTCGAGCTCGTTGGTATATGATACCCGAAGAGACTGCTTCGGGGCGTCAGCCGCATAACTTGAAGCGAGAGGTTTATTTAACGAATGATTTTGCTGACGTGGAGATGAGTTGTGTGCTGAGGCATTGTTTCGTTAAGTCTCCTAAGGAGTTTGCCAAGGCGGGTAACGATGGTGATGATGTTTTCTTGTGTGAGTATGAGTACGATGTGCATTGGCATAGCTTCAAGCGTTTGGCTGAGTTGGTGGATGGGGATTGCGAGAGTGATGACCATGAGTGGAGGGAAGAAGAGGAGGTTGGTGATGATAGTGATGAAGAGATGGAGGGGGAAGATGATTCCAAGAGTAAGATAGGTTTAGCAACGAGTTCTAAAGCTGCGAATTCGCTTAAAGGGAGGTTCTTTGGGCTTGACAAGGTGGGAGCGAAGCGGATTCCTGAGCATGTGAGATGCCATAAGCAGAGTGAGTTGGAGAAAGCGAAAGCTACGTTGTTGTTGGCGACGAGGCCTAAGTCTCTTCCATGTAGGAACAAGGAGATGGAGGAGATCACTGCGTTTATAAAAGGTTCCATCTTGGATGATCAGTGTTTAGGAAGGTGTATGTACATTCATGGTGTTCCTGGCACAGGGAAGACTGTTAGCGTGCTATCCGTTATGAAGAATCTGAAGGTTGAGGTTGAAGAAGGAAGTGTGAGCCCGTATTGCTTTGTGGAGATCAACGGTCTCAAACTGGCTTCACCTGAGAAGATTTACACTGTGATCTATGAGGCGTTGAGTGGTCATCGTGTGGGTTGGAAGAAAGCTTTGCAGTCTCTGAACGAGAGGTTTTCAGAAGGGAAACGTATTGGGAAAGAGGAAGAGAAGCCTTGCATACTTCTCATCGACGAGCTTGATCTCTTGGTTACTAGAAACCAGTCTGTTCTCTACAACATTTTGGATTGGCCCACCAGGCCTAACTCCAAGCTGATTGTGTTGGGGATAGCAAACACTATGGATCTTCCAGAGAAGCTGCTTCCTCGGATCTCAAGCCGAATGGGTATACAGAGACTATGTTTCGGTCCTTATAACCACACTCAGCTACAAGAGATCATCTCCACAAGGCTGAAAGGAATCGATGCTTTTGAGAAGCAAGCTATTGAGTTTGCTTCGAGGAAAGTAGCTGCGATCTCAGGAGATGCAAGACGTGCTCTCGAGATTTGCAGGCGTGCAGCTGAAGTGGCGGATTACCGTCTAAAGAACAACGCAACCGCGAAGCACCAGCTGGTGGTTATGGCAGATGTTGAAGCAGCGATCCAAGAGATGTTTCAAGCACCTCACATTCAAGTTATGAAGAGCGTTTCGAAGCTGAGTAAGATCTACTTGACGGCTATGGTTCACGAGCTATACAAGACAGGAATGGCTGAGACAACGTTTGACAGAGTGGCGACGACAGTTTCTTCTCTTTGTGGAACCAACGGAGAAGCTTTCCCTGGTTGGGACGTTCTTCTCAAAGTGGGTTGTGAACTTGGTGAATGCAGAATCATTCTCTGTGAGCCTGGAGAGAGGCACAGGTTGCAGAAGCTGCAGCTGAACTTTCCAAGTGATGATGTTGCTTTTGCATTGAAAGACAACAAGGATCTTCCATGGTTGGGAAATTACTTGTGA
Protein:  
MAASTPKTKTFQSPTKTPTSNVYRKSYLSPSSASHLTPQTPQTLTPLRRSARHVSRKIDLGDDADDHQEKNLNAPIEEMNLIRKRERAPRKQQSTDDLKTPNKKTKSKSNVNAEVSFSPVSPIRSEKKTSTTRKTKNTETLSNKRVFYNKVEFDSVQFQIGDDVYVKRKEEDEEDAEFEDCRICFRSGSSINNVMLECDDCLGGFHLKCLNPPLKEVPEGDWICSFCQGHEAPKPPEGKKLARTAREKLLSSDLWAARIEKLWRGGDGVYWIRARWYMIPEETASGRQPHNLKREVYLTNDFADVEMSCVLRHCFVKSPKEFAKAGNDGDDVFLCEYEYDVHWHSFKRLAELVDGDCESDDHEWREEEEVGDDSDEEMEGEDDSKSKIGLATSSKAANSLKGRFFGLDKVGAKRIPEHVRCHKQSELEKAKATLLLATRPKSLPCRNKEMEEITAFIKGSILDDQCLGRCMYIHGVPGTGKTVSVLSVMKNLKVEVEEGSVSPYCFVEINGLKLASPEKIYTVIYEALSGHRVGWKKALQSLNERFSEGKRIGKEEEKPCILLIDELDLLVTRNQSVLYNILDWPTRPNSKLIVLGIANTMDLPEKLLPRISSRMGIQRLCFGPYNHTQLQEIISTRLKGIDAFEKQAIEFASRKVAAISGDARRALEICRRAAEVADYRLKNNATAKHQLVVMADVEAAIQEMFQAPHIQVMKSVSKLSKIYLTAMVHELYKTGMAETTFDRVATTVSSLCGTNGEAFPGWDVLLKVGCELGECRIILCEPGERHRLQKLQLNFPSDDVAFALKDNKDLPWLGNYL